When I've searched for any files with Everything, results bar was empty, and all was OK without Everything.
I can suspect that it might be because my Windows was out of memory from yesterday because I've seen Windows message when I've logged in today. It was Process Monitor who have eaten all free memory (and some applications have closed as a result), so perhaps it may be used in order to reproduce the problem: its event record size is about 400 bytes and default history depth value is 200mln so it may use up to ~80GB of RAM, you only need to forget to close it for a while.

Maybe it is an Everything bug (service problem or whatever else) but it is a pity that TC is unable to detect such problem.